BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F07SP1|AL425900
(776 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 455 e-128
>3x_Contig1801
Length = 57606
Score = 455 bits (229), Expect = e-128
Identities = 231/233 (99%)
Strand = Plus / Minus
Query: 544 aatgaccaccgtgcccgtggacggtgattttmagatcgacgtaacccttttcagcggtaa 603
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 57606 aatgaccaccgtgcccgtggacggtgattttaagatcgacgtaacccttttcagcggtaa 57547
Query: 604 caggagcmgcaacgaacacgttgcctgatagtggaagaacagtgtttccctcatcaacca 663
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57546 caggagcagcaacgaacacgttgcctgatagtggaagaacagtgtttccctcatcaacca 57487
Query: 664 gtgcgtagataccattatcaccgtagcggtcgtgtaggaattcagacaagtacttagcac 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57486 gtgcgtagataccattatcaccgtagcggtcgtgtaggaattcagacaagtacttagcac 57427
Query: 724 caagcacaccagaactttcttcatcaaatccgtagacaatacaacacctcttt 776
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57426 caagcacaccagaactttcttcatcaaatccgtagacaatacaacacctcttt 57374
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5696
Number of Sequences: 1807
Number of extensions: 5696
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 776
length of database: 10,358,551
effective HSP length: 16
effective length of query: 760
effective length of database: 10,329,639
effective search space: 7850525640
effective search space used: 7850525640
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)